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Clonal groups of high-level gentamicin-resistant Enterococcus faecium isolated from municipal wastewater and clinical samples in Tehran, Iran

机译:从伊朗德黑兰的城市废水和临床样品中分离的高水平耐庆大霉素肠球菌克隆群

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摘要

Aims: Clonality among high-level gentamicin-resistant Enterococcus faecium (HLGR-EF) isolates obtained from clinical and sewage treatment plants (STP) were investigated using PhePlate system (PhP), ribotyping and pulsed-field gel electrophoresis (PFGE). Methods and Results: During 1 year study (September 2005–2006), a total of 106 HLGR-EF isolates were collected from clinical (n = 48) and STP (n = 58) samples in Tehran, Iran. Biochemical fingerprinting of these isolates using the PhP showed the presence of 21 PhP types (diversity index, Di = 0·97) among the clinical and 21 PhP types (Di = 0·91) among the STP isolates. Representative isolates of each PhP type (n = 42) were further characterized by the ribotyping method. Sixteen ribotypes were identified among the isolates with five types shared between the clinical and STP isolates. PFGE recognized 24 clonal types among these isolates with three pulsotypes shared between the clinical and STP isolates. Combination of the two techniques (PFGE and ribotyping) resulted in 24 (Di = 0·96) and 16 (Di = 0·93) types among the strains isolated from clinical and STP samples, respectively. Conclusions: We concluded that the combination of PhP typing, ribotyping and PFGE could be extremely discriminatory when examining HLGR-EF isolates. Significance and Impact of the Study: The emergence of highly diverse HLGR-EF population in Iran is of serious concern especially because of their multi-resistances.
机译:目的:使用PhePlate系统(PhP),核糖分型和脉冲场凝胶电泳(PFGE)研究从临床和污水处理厂(STP)获得的高水平耐庆大霉素肠球菌(HLGR-EF)分离株的克隆性。方法和结果:在为期1年的研究(2005年9月至2006年)中,从伊朗德黑兰的临床(n = 48)和STP(n = 58)样本中共收集了106份HLGR-EF分离株。使用PhP对这些分离物进行生化指纹分析显示,在临床中存在21种PhP类型(多样性指数,Di = 0·97),在STP分离物中存在21种PhP类型(Di = 0·91)。每种PhP类型的代表性分离株(n = 42)通过核糖分型法进一步表征。在分离株中鉴定出十六种核糖型,其中临床和STP分离株共有五种类型。 PFGE识别了这些分离株中的24种克隆类型,在临床分离株和STP分离株之间共有三种脉冲型。从临床和STP样品分离出的菌株中,两种技术(PFGE和核糖分型)的组合分别导致24种(Di = 0·96)和16种(Di = 0·93)类型。结论:我们得出结论,在检查HLGR-EF分离株时,PhP分型,核糖分型和PFGE的结合可能具有极大的歧视性。研究的意义和影响:伊朗高度多样化的HLGR-EF种群的出现令人严重关切,特别是因为它们的多抗性。

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